PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009773563.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 135aa    MW: 15438.1 Da    PI: 10.3035
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009773563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.4e-204191155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++ 
  XP_009773563.1 41 CRYLGVRRRP-WGRYAAEIRDPNT---KERHWLGTFDTAEEAALAYDRAARSMRS 91
                    6899******.**********933...5************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.21E-2541104No hitNo description
PfamPF008473.0E-134191IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-194297IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.9E-274298IPR001471AP2/ERF domain
SMARTSM003809.0E-2742105IPR001471AP2/ERF domain
PROSITE profilePS5103220.1524299IPR001471AP2/ERF domain
PRINTSPR003673.8E-94354IPR001471AP2/ERF domain
PRINTSPR003673.8E-96581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MNIIKSSTSS STNKSTKPRK NIGSNVSSNG KQNAEEQQNN CRYLGVRRRP WGRYAAEIRD  60
PNTKERHWLG TFDTAEEAAL AYDRAARSMR SNNNKSNKPI RTNFVYSDMP HGRECSCSCC  120
QLRGLQSLLH QQHQY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2043103667ATERF1
3gcc_A2e-2043103667ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009773563.11e-98PREDICTED: ethylene-responsive transcription factor LEP-like
SwissprotQ9M6441e-37LEP_ARATH; Ethylene-responsive transcription factor LEP
TrEMBLM0ZQ481e-52M0ZQ48_SOLTU; Uncharacterized protein
TrEMBLM0ZQ551e-52M0ZQ55_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000055854e-52(Solanum tuberosum)
STRINGPGSC0003DMT4000055963e-52(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53831934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.11e-26ERF family protein